Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVU_0523 | BVU_0574 | BVU_0523 | BVU_0574 | Phosphate acetyltransferase. | Acetyl-coenzyme A synthetase. | 0.921 |
BVU_0523 | BVU_0978 | BVU_0523 | BVU_0978 | Phosphate acetyltransferase. | 2-oxoglutarate synthase subunit KorB. | 0.916 |
BVU_0523 | BVU_0979 | BVU_0523 | BVU_0979 | Phosphate acetyltransferase. | 2-oxoglutarate synthase subunit korA. | 0.922 |
BVU_0523 | BVU_1463 | BVU_0523 | BVU_1463 | Phosphate acetyltransferase. | Pyruvate carboxylase subunit A; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.905 |
BVU_0523 | BVU_2311 | BVU_0523 | BVU_2311 | Phosphate acetyltransferase. | Ketoisovalerate oxidoreductase subunit VorA. | 0.916 |
BVU_0523 | BVU_2313 | BVU_0523 | BVU_2313 | Phosphate acetyltransferase. | Ketoisovalerate oxidoreductase subunit VorB. | 0.908 |
BVU_0523 | BVU_2880 | BVU_0523 | BVU_2880 | Phosphate acetyltransferase. | Formate acetyltransferase. | 0.912 |
BVU_0523 | BVU_3102 | BVU_0523 | BVU_3102 | Phosphate acetyltransferase. | propionyl-CoA carboxylase beta chain. | 0.907 |
BVU_0523 | BVU_3787 | BVU_0523 | BVU_3787 | Phosphate acetyltransferase. | Pyruvate-flavodoxin oxidoreductase. | 0.956 |
BVU_0523 | ackA | BVU_0523 | BVU_0524 | Phosphate acetyltransferase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.997 |
BVU_0574 | BVU_0523 | BVU_0574 | BVU_0523 | Acetyl-coenzyme A synthetase. | Phosphate acetyltransferase. | 0.921 |
BVU_0574 | BVU_0978 | BVU_0574 | BVU_0978 | Acetyl-coenzyme A synthetase. | 2-oxoglutarate synthase subunit KorB. | 0.914 |
BVU_0574 | BVU_0979 | BVU_0574 | BVU_0979 | Acetyl-coenzyme A synthetase. | 2-oxoglutarate synthase subunit korA. | 0.937 |
BVU_0574 | BVU_1463 | BVU_0574 | BVU_1463 | Acetyl-coenzyme A synthetase. | Pyruvate carboxylase subunit A; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.919 |
BVU_0574 | BVU_2311 | BVU_0574 | BVU_2311 | Acetyl-coenzyme A synthetase. | Ketoisovalerate oxidoreductase subunit VorA. | 0.935 |
BVU_0574 | BVU_2313 | BVU_0574 | BVU_2313 | Acetyl-coenzyme A synthetase. | Ketoisovalerate oxidoreductase subunit VorB. | 0.934 |
BVU_0574 | BVU_2880 | BVU_0574 | BVU_2880 | Acetyl-coenzyme A synthetase. | Formate acetyltransferase. | 0.908 |
BVU_0574 | BVU_3102 | BVU_0574 | BVU_3102 | Acetyl-coenzyme A synthetase. | propionyl-CoA carboxylase beta chain. | 0.922 |
BVU_0574 | BVU_3787 | BVU_0574 | BVU_3787 | Acetyl-coenzyme A synthetase. | Pyruvate-flavodoxin oxidoreductase. | 0.967 |
BVU_0574 | ackA | BVU_0574 | BVU_0524 | Acetyl-coenzyme A synthetase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.936 |
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