Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVU_0410 | BVU_0551 | BVU_0410 | BVU_0551 | Glutamine-dependent carbamyl phosphate synthetase. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.679 |
BVU_0410 | BVU_0592 | BVU_0410 | BVU_0592 | Glutamine-dependent carbamyl phosphate synthetase. | Argininosuccinate synthase. | 0.940 |
BVU_0410 | BVU_3997 | BVU_0410 | BVU_3997 | Glutamine-dependent carbamyl phosphate synthetase. | Carbamyl phosphate synthetase. | 0.901 |
BVU_0410 | argB | BVU_0410 | BVU_1338 | Glutamine-dependent carbamyl phosphate synthetase. | Putative acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.562 |
BVU_0410 | argC | BVU_0410 | BVU_0591 | Glutamine-dependent carbamyl phosphate synthetase. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.514 |
BVU_0410 | argH | BVU_0410 | BVU_0858 | Glutamine-dependent carbamyl phosphate synthetase. | Argininosuccinate lyase. | 0.557 |
BVU_0410 | purA | BVU_0410 | BVU_2018 | Glutamine-dependent carbamyl phosphate synthetase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.530 |
BVU_0551 | BVU_0410 | BVU_0551 | BVU_0410 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Glutamine-dependent carbamyl phosphate synthetase. | 0.679 |
BVU_0551 | BVU_0590 | BVU_0551 | BVU_0590 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.901 |
BVU_0551 | BVU_0592 | BVU_0551 | BVU_0592 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Argininosuccinate synthase. | 0.989 |
BVU_0551 | BVU_0593 | BVU_0551 | BVU_0593 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Conserved hypothetical protein. | 0.848 |
BVU_0551 | BVU_1483 | BVU_0551 | BVU_1483 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Putative peptidase/deacetylase. | 0.907 |
BVU_0551 | BVU_3997 | BVU_0551 | BVU_3997 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Carbamyl phosphate synthetase. | 0.679 |
BVU_0551 | argB | BVU_0551 | BVU_1338 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Putative acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.979 |
BVU_0551 | argC | BVU_0551 | BVU_0591 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.977 |
BVU_0551 | argH | BVU_0551 | BVU_0858 | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Argininosuccinate lyase. | 0.978 |
BVU_0590 | BVU_0551 | BVU_0590 | BVU_0551 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.901 |
BVU_0590 | BVU_0592 | BVU_0590 | BVU_0592 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Argininosuccinate synthase. | 0.987 |
BVU_0590 | BVU_0593 | BVU_0590 | BVU_0593 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Conserved hypothetical protein. | 0.926 |
BVU_0590 | BVU_1483 | BVU_0590 | BVU_1483 | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Putative peptidase/deacetylase. | 0.976 |
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