STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_0639Transcriptional regulator. (256 aa)    
Predicted Functional Partners:
BVU_3902
Putative two-component regulator sensor kinase, but no conserved domain.
 
 
 0.737
BVU_0380
Two-component system sensor histidine kinase, with response regulator receiver domain.
  
 
 0.704
BVU_0404
Transcriptional regulator.
  
     0.704
BVU_2734
Two-component system sensor histidine kinase, with response regulator receiver domain.
 
 
 0.679
BVU_1748
Putative two-component system sensor histidine kinase.
 
 
 0.670
BVU_0640
Glycoside hydrolase family 27; Related to alpha-galactosidases.
       0.618
BVU_2875
Transcriptional regulator.
  
     0.602
BVU_3996
Two-component system sensor histidine kinase.
 
 
 0.598
BVU_2725
Putative two-component histidine sensor kinase.
 
 
 0.585
BVU_1199
Conserved hypothetical protein.
  
 
 0.537
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.