Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVU_0181 | BVU_0737 | BVU_0181 | BVU_0737 | Glycoside hydrolase family 2, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 2 family. | Transcriptional regulator. | 0.634 |
BVU_0181 | BVU_0746 | BVU_0181 | BVU_0746 | Glycoside hydrolase family 2, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 2 family. | Alpha-galactosidase. | 0.406 |
BVU_0181 | BVU_0750 | BVU_0181 | BVU_0750 | Glycoside hydrolase family 2, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 2 family. | TPR-domain containing protein. | 0.733 |
BVU_0737 | BVU_0181 | BVU_0737 | BVU_0181 | Transcriptional regulator. | Glycoside hydrolase family 2, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 2 family. | 0.634 |
BVU_0737 | BVU_0750 | BVU_0737 | BVU_0750 | Transcriptional regulator. | TPR-domain containing protein. | 0.858 |
BVU_0737 | BVU_0751 | BVU_0737 | BVU_0751 | Transcriptional regulator. | xylose/H+ symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.470 |
BVU_0746 | BVU_0181 | BVU_0746 | BVU_0181 | Alpha-galactosidase. | Glycoside hydrolase family 2, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 2 family. | 0.406 |
BVU_0746 | BVU_0750 | BVU_0746 | BVU_0750 | Alpha-galactosidase. | TPR-domain containing protein. | 0.564 |
BVU_0750 | BVU_0181 | BVU_0750 | BVU_0181 | TPR-domain containing protein. | Glycoside hydrolase family 2, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 2 family. | 0.733 |
BVU_0750 | BVU_0737 | BVU_0750 | BVU_0737 | TPR-domain containing protein. | Transcriptional regulator. | 0.858 |
BVU_0750 | BVU_0746 | BVU_0750 | BVU_0746 | TPR-domain containing protein. | Alpha-galactosidase. | 0.564 |
BVU_0750 | BVU_0751 | BVU_0750 | BVU_0751 | TPR-domain containing protein. | xylose/H+ symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.901 |
BVU_0750 | BVU_2102 | BVU_0750 | BVU_2102 | TPR-domain containing protein. | Conserved hypothetical protein. | 0.561 |
BVU_0750 | BVU_3300 | BVU_0750 | BVU_3300 | TPR-domain containing protein. | Chaperone protein. | 0.600 |
BVU_0750 | BVU_3495 | BVU_0750 | BVU_3495 | TPR-domain containing protein. | Conserved hypothetical protein, with a cAMP-binding domain. | 0.547 |
BVU_0750 | dnaK | BVU_0750 | BVU_2382 | TPR-domain containing protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.588 |
BVU_0750 | polA | BVU_0750 | BVU_1207 | TPR-domain containing protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.570 |
BVU_0750 | rpoA | BVU_0750 | BVU_0780 | TPR-domain containing protein. | DNA-directed RNA polymerase alpha chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.549 |
BVU_0751 | BVU_0737 | BVU_0751 | BVU_0737 | xylose/H+ symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Transcriptional regulator. | 0.470 |
BVU_0751 | BVU_0750 | BVU_0751 | BVU_0750 | xylose/H+ symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | TPR-domain containing protein. | 0.901 |
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