Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BVU_0570 | BVU_0759 | Conserved hypothetical protein. | Putative ATPase. | 0.482 |
BVU_0570 | BVU_1498 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.405 |
BVU_0720 | BVU_0759 | Putative ATPase. | Putative ATPase. | 0.625 |
BVU_0720 | BVU_1498 | Putative ATPase. | Conserved hypothetical protein. | 0.502 |
BVU_0720 | BVU_2385 | Putative ATPase. | Conserved hypothetical protein. | 0.579 |
BVU_0720 | BVU_3429 | Putative ATPase. | Transcriptional regulator. | 0.527 |
BVU_0757 | BVU_0758 | Conserved hypothetical protein. | Putative acyltransferase. | 0.779 |
BVU_0757 | BVU_0759 | Conserved hypothetical protein. | Putative ATPase. | 0.465 |
BVU_0758 | BVU_0757 | Putative acyltransferase. | Conserved hypothetical protein. | 0.779 |
BVU_0758 | BVU_0759 | Putative acyltransferase. | Putative ATPase. | 0.468 |
BVU_0759 | BVU_0570 | Putative ATPase. | Conserved hypothetical protein. | 0.482 |
BVU_0759 | BVU_0720 | Putative ATPase. | Putative ATPase. | 0.625 |
BVU_0759 | BVU_0757 | Putative ATPase. | Conserved hypothetical protein. | 0.465 |
BVU_0759 | BVU_0758 | Putative ATPase. | Putative acyltransferase. | 0.468 |
BVU_0759 | BVU_0760 | Putative ATPase. | Alcohol dehydrogenase. | 0.476 |
BVU_0759 | BVU_0761 | Putative ATPase. | Putative amidase. | 0.476 |
BVU_0759 | BVU_1498 | Putative ATPase. | Conserved hypothetical protein. | 0.570 |
BVU_0759 | BVU_1507 | Putative ATPase. | Predicted ATPase. | 0.625 |
BVU_0759 | BVU_2385 | Putative ATPase. | Conserved hypothetical protein. | 0.671 |
BVU_0759 | BVU_3429 | Putative ATPase. | Transcriptional regulator. | 0.652 |
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