STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_0761Putative amidase. (251 aa)    
Predicted Functional Partners:
BVU_0760
Alcohol dehydrogenase.
       0.773
BVU_3505
Conserved hypothetical protein.
  
     0.595
BVU_3963
Glycosyltransferase family 2; Related to polysaccharide-forming beta-glycosyltransferases.
 
  
 0.582
BVU_3962
Conserved hypothetical protein.
 
  
 0.568
BVU_2232
Conserved hypothetical protein.
 
     0.558
BVU_3589
Putative Xaa-Pro dipeptidase.
    
  0.510
BVU_0528
Glycosyltransferase family 2; Related to beta-glycosyltransferases.
  
  
 0.504
BVU_3860
Glycosyltransferase family 2; Distantly related to glycosyltransferases.
  
  
 0.504
BVU_3982
Glycosyltransferase family 2; Related to beta-glycosyltransferases.
  
  
 0.504
BVU_2158
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.503
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.