Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BVU_0058 | BVU_0059 | Drug efflux protein. | Putative outer membrane protein TolC. | 0.955 |
BVU_0058 | BVU_0061 | Drug efflux protein. | Putative cation efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.977 |
BVU_0058 | BVU_0068 | Drug efflux protein. | Conserved hypothetical protein. | 0.668 |
BVU_0058 | BVU_0765 | Drug efflux protein. | Conserved hypothetical protein. | 0.725 |
BVU_0059 | BVU_0058 | Putative outer membrane protein TolC. | Drug efflux protein. | 0.955 |
BVU_0059 | BVU_0061 | Putative outer membrane protein TolC. | Putative cation efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.949 |
BVU_0059 | BVU_0068 | Putative outer membrane protein TolC. | Conserved hypothetical protein. | 0.659 |
BVU_0059 | BVU_0560 | Putative outer membrane protein TolC. | Conserved hypothetical protein. | 0.568 |
BVU_0059 | BVU_0562 | Putative outer membrane protein TolC. | Conserved hypothetical protein. | 0.509 |
BVU_0059 | BVU_0568 | Putative outer membrane protein TolC. | Putative outer membrane protein, probably involved in nutrient binding. | 0.607 |
BVU_0059 | BVU_0569 | Putative outer membrane protein TolC. | Conserved hypothetical protein. | 0.485 |
BVU_0059 | BVU_0765 | Putative outer membrane protein TolC. | Conserved hypothetical protein. | 0.622 |
BVU_0061 | BVU_0058 | Putative cation efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Drug efflux protein. | 0.977 |
BVU_0061 | BVU_0059 | Putative cation efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Putative outer membrane protein TolC. | 0.949 |
BVU_0061 | BVU_0068 | Putative cation efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Conserved hypothetical protein. | 0.643 |
BVU_0061 | BVU_0765 | Putative cation efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | Conserved hypothetical protein. | 0.583 |
BVU_0068 | BVU_0058 | Conserved hypothetical protein. | Drug efflux protein. | 0.668 |
BVU_0068 | BVU_0059 | Conserved hypothetical protein. | Putative outer membrane protein TolC. | 0.659 |
BVU_0068 | BVU_0061 | Conserved hypothetical protein. | Putative cation efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.643 |
BVU_0068 | BVU_0560 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.709 |
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