Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVU_0850 | BVU_0851 | BVU_0850 | BVU_0851 | Conserved hypothetical protein. | Putative TonB-linked outer membrane receptor. | 0.952 |
BVU_0850 | BVU_0852 | BVU_0850 | BVU_0852 | Conserved hypothetical protein. | DNA-3-methyladenine glycosylase I. | 0.412 |
BVU_0851 | BVU_0850 | BVU_0851 | BVU_0850 | Putative TonB-linked outer membrane receptor. | Conserved hypothetical protein. | 0.952 |
BVU_0851 | BVU_0852 | BVU_0851 | BVU_0852 | Putative TonB-linked outer membrane receptor. | DNA-3-methyladenine glycosylase I. | 0.476 |
BVU_0852 | BVU_0850 | BVU_0852 | BVU_0850 | DNA-3-methyladenine glycosylase I. | Conserved hypothetical protein. | 0.412 |
BVU_0852 | BVU_0851 | BVU_0852 | BVU_0851 | DNA-3-methyladenine glycosylase I. | Putative TonB-linked outer membrane receptor. | 0.476 |
BVU_0852 | BVU_0853 | BVU_0852 | BVU_0853 | DNA-3-methyladenine glycosylase I. | Hypothetical protein. | 0.400 |
BVU_0852 | polA | BVU_0852 | BVU_1207 | DNA-3-methyladenine glycosylase I. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.552 |
BVU_0853 | BVU_0852 | BVU_0853 | BVU_0852 | Hypothetical protein. | DNA-3-methyladenine glycosylase I. | 0.400 |
polA | BVU_0852 | BVU_1207 | BVU_0852 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | DNA-3-methyladenine glycosylase I. | 0.552 |