STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_0997Glycoside hydrolase family 2, candidate beta-galactosidase. (1109 aa)    
Predicted Functional Partners:
BVU_0191
ROK family transcriptional repressor, with glucokinase domain.
    
 0.903
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.810
BVU_0391
Glycoside hydrolase family 2, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.751
BVU_1808
Glycoside hydrolase family 2, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.751
BVU_2162
Glycoside hydrolase family 2, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.751
BVU_2171
Glycoside hydrolase family 2, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.750
BVU_1151
Glycoside hydrolase family 2, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.749
BVU_4134
Glycoside hydrolase family 2, candidate beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
 
 
0.748
BVU_1785
Glycoside hydrolase family 2, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.747
BVU_3844
Glycoside hydrolase family 2, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.747
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.