STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_1073Glycosyltransferase family 4; Related to alpha-glycosyltransferases. (438 aa)    
Predicted Functional Partners:
BVU_1071
Glycosyltransferase family 2; Related to beta-glycosyltransferases.
  
    0.652
BVU_1072
ABC transporter ATP-binding protein.
  
 
 0.651
BVU_1070
Hypothetical protein.
       0.601
BVU_1074
Glycosyltransferase family 2; Related to beta-glycosyltransferases.
  
    0.514
BVU_0694
Putative epimerase/dehydratase, involved in capsular polysaccharide biosynthesis.
  
  
 0.475
BVU_1540
Putative epimerase/dehydratase.
  
  
 0.475
BVU_3322
Glycoside hydrolase family 13, candidate 1,4-alpha-glucan branching enzyme.
   
 0.474
BVU_2638
ATP-dependent DNA helicase.
    
 
 0.413
BVU_0696
Putative glycosyltransferase.
  
     0.412
BVU_1538
Putative glycosyltransferase.
  
     0.412
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.