Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVU_1089 | BVU_1234 | BVU_1089 | BVU_1234 | NAD-dependent epimerase. | Conserved hypothetical protein. | 0.470 |
BVU_1231 | BVU_1232 | BVU_1231 | BVU_1232 | Putative TonB-dependent outer membrane receptor protein. | Acid phosphatase. | 0.888 |
BVU_1231 | BVU_1233 | BVU_1231 | BVU_1233 | Putative TonB-dependent outer membrane receptor protein. | Putative Na+/Ca2+ exchanger protein. | 0.620 |
BVU_1231 | BVU_1234 | BVU_1231 | BVU_1234 | Putative TonB-dependent outer membrane receptor protein. | Conserved hypothetical protein. | 0.483 |
BVU_1231 | BVU_1235 | BVU_1231 | BVU_1235 | Putative TonB-dependent outer membrane receptor protein. | DNA topoisomerase IV subunit B. | 0.412 |
BVU_1232 | BVU_1231 | BVU_1232 | BVU_1231 | Acid phosphatase. | Putative TonB-dependent outer membrane receptor protein. | 0.888 |
BVU_1232 | BVU_1233 | BVU_1232 | BVU_1233 | Acid phosphatase. | Putative Na+/Ca2+ exchanger protein. | 0.635 |
BVU_1232 | BVU_1234 | BVU_1232 | BVU_1234 | Acid phosphatase. | Conserved hypothetical protein. | 0.498 |
BVU_1232 | BVU_1235 | BVU_1232 | BVU_1235 | Acid phosphatase. | DNA topoisomerase IV subunit B. | 0.442 |
BVU_1232 | BVU_1237 | BVU_1232 | BVU_1237 | Acid phosphatase. | Carboxy-terminal processing protease precursor; Belongs to the peptidase S41A family. | 0.420 |
BVU_1232 | coaD | BVU_1232 | BVU_1236 | Acid phosphatase. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.403 |
BVU_1233 | BVU_1231 | BVU_1233 | BVU_1231 | Putative Na+/Ca2+ exchanger protein. | Putative TonB-dependent outer membrane receptor protein. | 0.620 |
BVU_1233 | BVU_1232 | BVU_1233 | BVU_1232 | Putative Na+/Ca2+ exchanger protein. | Acid phosphatase. | 0.635 |
BVU_1233 | BVU_1234 | BVU_1233 | BVU_1234 | Putative Na+/Ca2+ exchanger protein. | Conserved hypothetical protein. | 0.740 |
BVU_1233 | BVU_1235 | BVU_1233 | BVU_1235 | Putative Na+/Ca2+ exchanger protein. | DNA topoisomerase IV subunit B. | 0.702 |
BVU_1233 | BVU_1237 | BVU_1233 | BVU_1237 | Putative Na+/Ca2+ exchanger protein. | Carboxy-terminal processing protease precursor; Belongs to the peptidase S41A family. | 0.687 |
BVU_1233 | coaD | BVU_1233 | BVU_1236 | Putative Na+/Ca2+ exchanger protein. | Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.687 |
BVU_1234 | BVU_1089 | BVU_1234 | BVU_1089 | Conserved hypothetical protein. | NAD-dependent epimerase. | 0.470 |
BVU_1234 | BVU_1231 | BVU_1234 | BVU_1231 | Conserved hypothetical protein. | Putative TonB-dependent outer membrane receptor protein. | 0.483 |
BVU_1234 | BVU_1232 | BVU_1234 | BVU_1232 | Conserved hypothetical protein. | Acid phosphatase. | 0.498 |
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