STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_1237Carboxy-terminal processing protease precursor; Belongs to the peptidase S41A family. (533 aa)    
Predicted Functional Partners:
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.855
BVU_1235
DNA topoisomerase IV subunit B.
  
  
 0.834
BVU_1234
Conserved hypothetical protein.
  
    0.783
BVU_1233
Putative Na+/Ca2+ exchanger protein.
       0.687
BVU_2068
Conserved hypothetical protein.
 
 
 
 0.569
BVU_0425
Peptidyl-prolyl cis-trans isomerase.
 
 
 0.448
BVU_1912
Glycoside hydrolase family 23; Related to peptidoglycan lytic transglycosylases.
 
  
 0.438
BVU_3336
Penicillin-binding protein 1A; Glycosyltransferase family 51, candidate bifunctional family GT51 beta-glycosyltransferase/PBP transpeptidase.
  
     0.422
BVU_1232
Acid phosphatase.
  
    0.420
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.