STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_1258Signal peptidase I. (474 aa)    
Predicted Functional Partners:
BVU_1257
Dihydrodipicolinate reductase; Belongs to the DapB family.
 
    0.886
BVU_1260
Conserved hypothetical protein.
 
     0.839
BVU_1256
Conserved hypothetical protein.
 
     0.803
BVU_1259
Signal peptidase I; Belongs to the peptidase S26 family.
 
    
0.800
BVU_3041
Conserved hypothetical protein.
 
  
 0.759
yidC
Conserved hypothetical protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
 
  
 0.759
BVU_1395
Putative cell division protein.
  
  
 0.732
BVU_1652
Membrane-associated zinc metalloprotease.
 
  
 0.729
BVU_1261
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 0.704
BVU_2305
Conserved hypothetical exported protein.
  
     0.684
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.