STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_1301Putative haloacid dehalogenase-like hydrolase. (204 aa)    
Predicted Functional Partners:
BVU_3804
Putative phosphoglucomutase.
 
 
 0.922
BVU_0191
ROK family transcriptional repressor, with glucokinase domain.
   
 
 0.906
BVU_0743
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
   
 
  0.903
BVU_2225
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
   
 
  0.903
BVU_2324
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
   
 
  0.903
BVU_2327
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
   
 
  0.903
BVU_1300
Putative riboflavin kinase; Belongs to the ribF family.
  
  
 0.888
BVU_3510
Glycosyltransferase family 35, candidate alpha-glucan phosphorylase.
  
 
 0.819
BVU_3559
Glycosyltransferase family 35, candidate alpha-glucan phosphorylase.
  
 
 0.819
BVU_1302
Putative transmembrane calcium-transporting ATPase.
  
    0.816
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.