STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucIL-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. (591 aa)    
Predicted Functional Partners:
BVU_0595
Rhamnulose kinase/L-fuculose kinase.
 
 
 0.868
BVU_1374
Transcriptional regulator, FucR.
  
    0.824
BVU_1272
Fructokinase.
    
  0.804
BVU_1665
Fructokinase.
    
  0.804
BVU_1372
Putative L-fucose permease.
 
  
 0.676
BVU_0190
Conserved hypothetical protein.
  
 
 0.598
BVU_1251
Putative lactaldehyde reductase.
  
  
 0.484
BVU_1745
Glycoside hydrolase family 29; Related to alpha-L-fucosidases.
 
   
 0.464
rhaA
L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
  
   
 0.454
BVU_0102
Glycoside hydrolase family 29, candidate alpha-L-fucosidase.
 
   
 0.410
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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