Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVU_0102 | fucI | BVU_0102 | BVU_1373 | Glycoside hydrolase family 29, candidate alpha-L-fucosidase. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.410 |
BVU_0190 | BVU_0595 | BVU_0190 | BVU_0595 | Conserved hypothetical protein. | Rhamnulose kinase/L-fuculose kinase. | 0.549 |
BVU_0190 | BVU_1372 | BVU_0190 | BVU_1372 | Conserved hypothetical protein. | Putative L-fucose permease. | 0.593 |
BVU_0190 | fucI | BVU_0190 | BVU_1373 | Conserved hypothetical protein. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.598 |
BVU_0190 | rhaA | BVU_0190 | BVU_0596 | Conserved hypothetical protein. | L-rhamnose isomerase; Belongs to the rhamnose isomerase family. | 0.808 |
BVU_0595 | BVU_0190 | BVU_0595 | BVU_0190 | Rhamnulose kinase/L-fuculose kinase. | Conserved hypothetical protein. | 0.549 |
BVU_0595 | fucI | BVU_0595 | BVU_1373 | Rhamnulose kinase/L-fuculose kinase. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.868 |
BVU_0595 | rhaA | BVU_0595 | BVU_0596 | Rhamnulose kinase/L-fuculose kinase. | L-rhamnose isomerase; Belongs to the rhamnose isomerase family. | 0.998 |
BVU_1251 | fucI | BVU_1251 | BVU_1373 | Putative lactaldehyde reductase. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.484 |
BVU_1272 | BVU_1665 | BVU_1272 | BVU_1665 | Fructokinase. | Fructokinase. | 0.951 |
BVU_1272 | fucI | BVU_1272 | BVU_1373 | Fructokinase. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.804 |
BVU_1372 | BVU_0190 | BVU_1372 | BVU_0190 | Putative L-fucose permease. | Conserved hypothetical protein. | 0.593 |
BVU_1372 | BVU_1374 | BVU_1372 | BVU_1374 | Putative L-fucose permease. | Transcriptional regulator, FucR. | 0.616 |
BVU_1372 | fucI | BVU_1372 | BVU_1373 | Putative L-fucose permease. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.676 |
BVU_1374 | BVU_1372 | BVU_1374 | BVU_1372 | Transcriptional regulator, FucR. | Putative L-fucose permease. | 0.616 |
BVU_1374 | fucI | BVU_1374 | BVU_1373 | Transcriptional regulator, FucR. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.824 |
BVU_1665 | BVU_1272 | BVU_1665 | BVU_1272 | Fructokinase. | Fructokinase. | 0.951 |
BVU_1665 | fucI | BVU_1665 | BVU_1373 | Fructokinase. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.804 |
BVU_1745 | fucI | BVU_1745 | BVU_1373 | Glycoside hydrolase family 29; Related to alpha-L-fucosidases. | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | 0.464 |
fucI | BVU_0102 | BVU_1373 | BVU_0102 | L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | Glycoside hydrolase family 29, candidate alpha-L-fucosidase. | 0.410 |
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