STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_1551Helicase, putative. (753 aa)    
Predicted Functional Partners:
BVU_1552
Two-component system sensor histidine kinase.
 
     0.817
BVU_0656
Conserved hypothetical protein.
  
     0.772
BVU_1575
Conserved hypothetical protein.
  
     0.772
BVU_1590
Conserved hypothetical protein.
  
    0.769
BVU_0646
Conserved hypothetical protein.
  
     0.758
BVU_0756
Conserved hypothetical protein.
 
     0.753
BVU_3212
Conserved hypothetical protein.
  
    0.751
BVU_1522
Conserved hypothetical protein.
  
     0.748
BVU_0969
Conserved hypothetical protein.
 
     0.747
BVU_0390
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.737
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.