STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_1624Putative aminopeptidase. (497 aa)    
Predicted Functional Partners:
BVU_3876
Dipeptidyl aminopeptidase.
  
    0.727
BVU_1991
Dipeptidyl peptidase IV.
  
    0.713
BVU_1094
Dipeptidyl peptidase IV.
  
    0.643
BVU_1625
Putative transmembrane transport efflux protein.
  
    0.533
BVU_1121
Peptidase.
  
    0.491
BVU_3048
Putative H+/peptide symporter.
 
   0.489
BVU_1858
glutaryl-7-ACA acylase precursor.
 
    0.487
BVU_0189
Putative L-asparaginase.
  
  
 0.482
BVU_0731
Conserved hypothetical protein.
  
    0.480
BVU_3355
Prolyl oligopeptidase family protein.
  
    0.478
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.