STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kduI-24-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (320 aa)    
Predicted Functional Partners:
BVU_0165
Hypothetical protein.
     
 0.905
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
  
  
 
0.903
BVU_1797
Conserved hypothetical protein.
 
   
 0.827
BVU_1796
Putative phosphotransferase enzyme II, C component.
  
    0.793
BVU_2643
Conserved hypothetical protein.
 
   
 0.719
BVU_1872
Conserved hypothetical protein.
 
   
 0.715
BVU_1304
Conserved hypothetical protein, putative cytoplasmic protein.
 
   
 0.711
BVU_1106
Gluconate 5-dehydrogenase.
 
  
 0.702
BVU_0115
Glycoside hydrolase family 88, candidate delta-4,5 unsaturated glucuronyl hydrolase.
 
   
 0.588
BVU_0137
Glycoside hydrolase family 88, candidate delta-4,5 unsaturated glucuronyl hydrolase.
 
   
 0.576
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.