STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_1796Putative phosphotransferase enzyme II, C component. (463 aa)    
Predicted Functional Partners:
kduI-2
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
  
    0.793
BVU_1797
Conserved hypothetical protein.
  
    0.670
BVU_1794
Hexuronate transporter.
       0.661
BVU_0222
Sorbitol dehydrogenase.
  
 0.627
BVU_1106
Gluconate 5-dehydrogenase.
  
    0.588
BVU_3773
Putative oxidoreductase.
  
    0.562
BVU_0384
3-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.552
BVU_1011
3-oxoacyl-[acyl-carrier protein] reductase.
  
    0.552
BVU_1261
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.552
BVU_1966
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.552
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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