STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_1871Conserved hypothetical protein. (702 aa)    
Predicted Functional Partners:
BVU_1870
Hypothetical protein.
 
    0.939
BVU_0182
Carbohydrate esterase family 12; Related to pectin acetylesterases.
 
     0.745
BVU_1790
Glycoside hydrolase family 43; Related to beta-xylosidases/alpha-L-arabinofuranosidases.
 
   
 0.716
BVU_0507
Glycoside hydrolase family 43; Distantly related to beta-glycosidases; Belongs to the glycosyl hydrolase 43 family.
   
 0.714
BVU_0160
Carbohydrate esterase family 12 protein; Tandem repeat of two modules related to pectin acetylesterases.
 
     0.703
BVU_1872
Conserved hypothetical protein.
 
     0.703
BVU_0180
Glycoside hydrolase family 43; Modular protein with tandem of two domains distantly related to beta-glycosidases and C-terminal CBM32 module.
 
   
 0.700
BVU_1767
Glycoside hydrolase family 28; Related to polygalacturonases; Belongs to the glycosyl hydrolase 28 family.
  
     0.686
BVU_0187
Conserved hypothetical protein.
 
     0.674
BVU_0151
Conserved hypothetical protein, putative cytoplasmic protein.
 
     0.661
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.