STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_1913Conserved hypothetical protein. (187 aa)    
Predicted Functional Partners:
BVU_1912
Glycoside hydrolase family 23; Related to peptidoglycan lytic transglycosylases.
  
    0.861
BVU_4149
Conserved hypothetical exported protein.
  
    0.779
BVU_3041
Conserved hypothetical protein.
  
     0.745
BVU_1103
Conserved hypothetical protein.
  
     0.742
BVU_2564
Putative outer membrane protein.
  
     0.735
BVU_0868
Putative outer membrane protein.
  
    0.734
BVU_1911
GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
       0.719
BVU_0424
Conserved hypothetical protein.
  
     0.700
BVU_3065
Putative surface membrane protein.
  
    0.694
BVU_1376
Conserved hypothetical protein.
  
     0.691
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.