Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVU_0486 | BVU_1995 | BVU_0486 | BVU_1995 | ATP-dependent exonuclease sbcC. | Conserved hypothetical protein; Belongs to the SUA5 family. | 0.449 |
BVU_0486 | BVU_1996 | BVU_0486 | BVU_1996 | ATP-dependent exonuclease sbcC. | Putative helicase. | 0.453 |
BVU_1636 | BVU_1995 | BVU_1636 | BVU_1995 | Putative translation initiation factor SUI1. | Conserved hypothetical protein; Belongs to the SUA5 family. | 0.424 |
BVU_1994 | BVU_1995 | BVU_1994 | BVU_1995 | Putative transport protein. | Conserved hypothetical protein; Belongs to the SUA5 family. | 0.663 |
BVU_1994 | BVU_1996 | BVU_1994 | BVU_1996 | Putative transport protein. | Putative helicase. | 0.663 |
BVU_1995 | BVU_0486 | BVU_1995 | BVU_0486 | Conserved hypothetical protein; Belongs to the SUA5 family. | ATP-dependent exonuclease sbcC. | 0.449 |
BVU_1995 | BVU_1636 | BVU_1995 | BVU_1636 | Conserved hypothetical protein; Belongs to the SUA5 family. | Putative translation initiation factor SUI1. | 0.424 |
BVU_1995 | BVU_1994 | BVU_1995 | BVU_1994 | Conserved hypothetical protein; Belongs to the SUA5 family. | Putative transport protein. | 0.663 |
BVU_1995 | BVU_1996 | BVU_1995 | BVU_1996 | Conserved hypothetical protein; Belongs to the SUA5 family. | Putative helicase. | 0.874 |
BVU_1995 | BVU_2067 | BVU_1995 | BVU_2067 | Conserved hypothetical protein; Belongs to the SUA5 family. | Putative transmembrane protein. | 0.518 |
BVU_1995 | tsaD | BVU_1995 | BVU_3277 | Conserved hypothetical protein; Belongs to the SUA5 family. | Putative O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.613 |
BVU_1996 | BVU_0486 | BVU_1996 | BVU_0486 | Putative helicase. | ATP-dependent exonuclease sbcC. | 0.453 |
BVU_1996 | BVU_1994 | BVU_1996 | BVU_1994 | Putative helicase. | Putative transport protein. | 0.663 |
BVU_1996 | BVU_1995 | BVU_1996 | BVU_1995 | Putative helicase. | Conserved hypothetical protein; Belongs to the SUA5 family. | 0.874 |
BVU_2067 | BVU_1995 | BVU_2067 | BVU_1995 | Putative transmembrane protein. | Conserved hypothetical protein; Belongs to the SUA5 family. | 0.518 |
tsaD | BVU_1995 | BVU_3277 | BVU_1995 | Putative O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | Conserved hypothetical protein; Belongs to the SUA5 family. | 0.613 |