Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVU_1257 | BVU_2050 | BVU_1257 | BVU_2050 | Dihydrodipicolinate reductase; Belongs to the DapB family. | Putative aspartokinase I-homoserine dehydrogenase. | 0.545 |
BVU_1257 | BVU_2062 | BVU_1257 | BVU_2062 | Dihydrodipicolinate reductase; Belongs to the DapB family. | Putative aminotransferase. | 0.912 |
BVU_1257 | BVU_4042 | BVU_1257 | BVU_4042 | Dihydrodipicolinate reductase; Belongs to the DapB family. | Diaminopimelate decarboxylase. | 0.633 |
BVU_1257 | dapF | BVU_1257 | BVU_4006 | Dihydrodipicolinate reductase; Belongs to the DapB family. | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.411 |
BVU_1257 | dapL | BVU_1257 | BVU_4005 | Dihydrodipicolinate reductase; Belongs to the DapB family. | Aspartate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. | 0.912 |
BVU_2050 | BVU_1257 | BVU_2050 | BVU_1257 | Putative aspartokinase I-homoserine dehydrogenase. | Dihydrodipicolinate reductase; Belongs to the DapB family. | 0.545 |
BVU_2050 | BVU_2060 | BVU_2050 | BVU_2060 | Putative aspartokinase I-homoserine dehydrogenase. | Chorismate mutase/prephenate dehydratase. | 0.487 |
BVU_2050 | BVU_2061 | BVU_2050 | BVU_2061 | Putative aspartokinase I-homoserine dehydrogenase. | Putative phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.728 |
BVU_2050 | BVU_2062 | BVU_2050 | BVU_2062 | Putative aspartokinase I-homoserine dehydrogenase. | Putative aminotransferase. | 0.510 |
BVU_2050 | BVU_2063 | BVU_2050 | BVU_2063 | Putative aspartokinase I-homoserine dehydrogenase. | Prephenate dehydratase. | 0.668 |
BVU_2050 | BVU_3604 | BVU_2050 | BVU_3604 | Putative aspartokinase I-homoserine dehydrogenase. | Putative proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydraogenase; Belongs to the aldehyde dehydrogenase family. | 0.467 |
BVU_2050 | dapL | BVU_2050 | BVU_4005 | Putative aspartokinase I-homoserine dehydrogenase. | Aspartate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. | 0.510 |
BVU_2050 | ilvD | BVU_2050 | BVU_2554 | Putative aspartokinase I-homoserine dehydrogenase. | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.693 |
BVU_2060 | BVU_2050 | BVU_2060 | BVU_2050 | Chorismate mutase/prephenate dehydratase. | Putative aspartokinase I-homoserine dehydrogenase. | 0.487 |
BVU_2060 | BVU_2061 | BVU_2060 | BVU_2061 | Chorismate mutase/prephenate dehydratase. | Putative phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.957 |
BVU_2060 | BVU_2062 | BVU_2060 | BVU_2062 | Chorismate mutase/prephenate dehydratase. | Putative aminotransferase. | 0.899 |
BVU_2060 | BVU_2063 | BVU_2060 | BVU_2063 | Chorismate mutase/prephenate dehydratase. | Prephenate dehydratase. | 0.904 |
BVU_2061 | BVU_2050 | BVU_2061 | BVU_2050 | Putative phospho-2-dehydro-3-deoxyheptonate aldolase. | Putative aspartokinase I-homoserine dehydrogenase. | 0.728 |
BVU_2061 | BVU_2060 | BVU_2061 | BVU_2060 | Putative phospho-2-dehydro-3-deoxyheptonate aldolase. | Chorismate mutase/prephenate dehydratase. | 0.957 |
BVU_2061 | BVU_2062 | BVU_2061 | BVU_2062 | Putative phospho-2-dehydro-3-deoxyheptonate aldolase. | Putative aminotransferase. | 0.842 |
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