Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BVU_0949 | BVU_1196 | Conserved hypothetical protein. | Glycoside hydrolase family 20; Related to beta-N-acetylhexosaminidases. | 0.455 |
BVU_0949 | BVU_2069 | Conserved hypothetical protein. | Glycoside hydrolase family 84; Related to beta-N-acetylhexosaminidases. | 0.556 |
BVU_1196 | BVU_0949 | Glycoside hydrolase family 20; Related to beta-N-acetylhexosaminidases. | Conserved hypothetical protein. | 0.455 |
BVU_1196 | BVU_1860 | Glycoside hydrolase family 20; Related to beta-N-acetylhexosaminidases. | Glycoside hydrolase family 89; Related to alpha-N-acetylglucosaminidases. | 0.660 |
BVU_1196 | BVU_2069 | Glycoside hydrolase family 20; Related to beta-N-acetylhexosaminidases. | Glycoside hydrolase family 84; Related to beta-N-acetylhexosaminidases. | 0.723 |
BVU_1196 | BVU_2198 | Glycoside hydrolase family 20; Related to beta-N-acetylhexosaminidases. | Conserved hypothetical protein. | 0.573 |
BVU_1196 | BVU_4143 | Glycoside hydrolase family 20; Related to beta-N-acetylhexosaminidases. | Glycoside hydrolase family 33, candidate sialidase. | 0.468 |
BVU_1860 | BVU_1196 | Glycoside hydrolase family 89; Related to alpha-N-acetylglucosaminidases. | Glycoside hydrolase family 20; Related to beta-N-acetylhexosaminidases. | 0.660 |
BVU_1860 | BVU_2069 | Glycoside hydrolase family 89; Related to alpha-N-acetylglucosaminidases. | Glycoside hydrolase family 84; Related to beta-N-acetylhexosaminidases. | 0.518 |
BVU_2041 | BVU_2069 | Putative oxidoreductase; Glycosidase; Belongs to the Gfo/Idh/MocA family. Glycosyl hydrolase 109 subfamily. | Glycoside hydrolase family 84; Related to beta-N-acetylhexosaminidases. | 0.446 |
BVU_2041 | BVU_2198 | Putative oxidoreductase; Glycosidase; Belongs to the Gfo/Idh/MocA family. Glycosyl hydrolase 109 subfamily. | Conserved hypothetical protein. | 0.472 |
BVU_2067 | BVU_2068 | Putative transmembrane protein. | Conserved hypothetical protein. | 0.651 |
BVU_2067 | BVU_2069 | Putative transmembrane protein. | Glycoside hydrolase family 84; Related to beta-N-acetylhexosaminidases. | 0.586 |
BVU_2067 | BVU_2070 | Putative transmembrane protein. | ATP-dependent DNA helicase RecQ. | 0.479 |
BVU_2068 | BVU_2067 | Conserved hypothetical protein. | Putative transmembrane protein. | 0.651 |
BVU_2068 | BVU_2069 | Conserved hypothetical protein. | Glycoside hydrolase family 84; Related to beta-N-acetylhexosaminidases. | 0.776 |
BVU_2068 | BVU_2070 | Conserved hypothetical protein. | ATP-dependent DNA helicase RecQ. | 0.793 |
BVU_2068 | BVU_2071 | Conserved hypothetical protein. | Putative single-stranded-DNA-specific exonuclease. | 0.666 |
BVU_2069 | BVU_0949 | Glycoside hydrolase family 84; Related to beta-N-acetylhexosaminidases. | Conserved hypothetical protein. | 0.556 |
BVU_2069 | BVU_1196 | Glycoside hydrolase family 84; Related to beta-N-acetylhexosaminidases. | Glycoside hydrolase family 20; Related to beta-N-acetylhexosaminidases. | 0.723 |
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