STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_2229Glycoside hydrolase family 43; Related to beta-glycosidases. (877 aa)    
Predicted Functional Partners:
BVU_2232
Conserved hypothetical protein.
 
  
 0.871
BVU_2231
Glycoside hydrolase family 43; Related to beta-xylosidases/alpha-L-arabinofuranosidases.
 
     0.815
BVU_2230
Glycoside hydrolase family 43; Related to beta-xylosidases/alpha-L-arabinofuranosidases; Belongs to the glycosyl hydrolase 43 family.
 
    
0.795
BVU_1787
Glycoside hydrolase family 78; Distantly related to alpha-L-rhamnosidases.
 
     0.771
BVU_1059
Hypothetical protein.
  
     0.737
BVU_3968
Glycosyltransferase family 23; Distantly related to alpha-fucosyltransferases.
  
     0.721
BVU_0368
Conserved hypothetical protein.
 
     0.708
BVU_4166
Conserved hypothetical protein.
  
     0.695
BVU_0963
Conserved hypothetical protein.
  
     0.694
BVU_2228
Putative outer membrane protein, probably involved in nutrient binding.
 
   
 0.690
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.