STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_2230Glycoside hydrolase family 43; Related to beta-xylosidases/alpha-L-arabinofuranosidases; Belongs to the glycosyl hydrolase 43 family. (322 aa)    
Predicted Functional Partners:
BVU_2232
Conserved hypothetical protein.
 
  
 0.886
BVU_2231
Glycoside hydrolase family 43; Related to beta-xylosidases/alpha-L-arabinofuranosidases.
 
    
0.869
BVU_2229
Glycoside hydrolase family 43; Related to beta-glycosidases.
 
    
0.795
BVU_2224
Glycoside hydrolase family 2, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 2 family.
 
     0.764
BVU_2228
Putative outer membrane protein, probably involved in nutrient binding.
 
     0.701
BVU_1002
Glycoside hydrolase family 43; Related to beta-xylosidases/alpha-L-arabinofuranosidases; Belongs to the glycosyl hydrolase 43 family.
  
     0.688
BVU_0031
Glycoside hydrolase family 43; Related to beta-xylosidases/alpha-L-arabinofuranosidases; Belongs to the glycosyl hydrolase 43 family.
  
     0.585
BVU_2227
Putative outer membrane protein, probably involved in nutrient binding.
 
     0.568
BVU_1008
Glycoside hydrolase family 43; Related to beta-xylosidases/alpha-L-arabinofuranosidases.
  
     0.562
BVU_0490
Conserved hypothetical protein.
 
   
 0.453
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.