STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_2324Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer. (384 aa)    
Predicted Functional Partners:
BVU_2325
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 0.984
BVU_0191
ROK family transcriptional repressor, with glucokinase domain.
  
 
 0.913
BVU_0736
Glycoside hydrolase family 36, candidate alpha-glycosidase; Related to alpha-galactosidases.
  
 
  0.905
BVU_0746
Alpha-galactosidase.
  
 
  0.905
BVU_1301
Putative haloacid dehalogenase-like hydrolase.
   
 
  0.903
BVU_2323
Na+/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.747
BVU_0179
Glycoside hydrolase family 42; Related to beta-galactosidases.
  
 
 0.686
BVU_0495
Glycoside hydrolase family 35, candidate beta-glycosidase; Related to beta-galactosidases; Belongs to the glycosyl hydrolase 35 family.
  
 
 0.686
BVU_0301
Glycoside hydrolase family 2; Related to beta-galactosidases.
  
 
 0.676
BVU_0391
Glycoside hydrolase family 2, candidate beta-glycosidase; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.676
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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