Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVU_1894 | BVU_2359 | BVU_1894 | BVU_2359 | Fructose-bisphosphate aldolase class I. | Conserved hypothetical protein. | 0.403 |
BVU_2092 | BVU_2357 | BVU_2092 | BVU_2357 | Putative exported cytochrome C biogenesis-related protein. | Glycoside hydrolase family 23; Related to peptidoglycan lytic transglycosylases. | 0.468 |
BVU_2092 | BVU_2358 | BVU_2092 | BVU_2358 | Putative exported cytochrome C biogenesis-related protein. | Uridine kinase. | 0.454 |
BVU_2092 | BVU_2359 | BVU_2092 | BVU_2359 | Putative exported cytochrome C biogenesis-related protein. | Conserved hypothetical protein. | 0.454 |
BVU_2357 | BVU_2092 | BVU_2357 | BVU_2092 | Glycoside hydrolase family 23; Related to peptidoglycan lytic transglycosylases. | Putative exported cytochrome C biogenesis-related protein. | 0.468 |
BVU_2357 | BVU_2358 | BVU_2357 | BVU_2358 | Glycoside hydrolase family 23; Related to peptidoglycan lytic transglycosylases. | Uridine kinase. | 0.855 |
BVU_2357 | BVU_2359 | BVU_2357 | BVU_2359 | Glycoside hydrolase family 23; Related to peptidoglycan lytic transglycosylases. | Conserved hypothetical protein. | 0.729 |
BVU_2357 | BVU_2360 | BVU_2357 | BVU_2360 | Glycoside hydrolase family 23; Related to peptidoglycan lytic transglycosylases. | Conserved hypothetical protein. | 0.764 |
BVU_2358 | BVU_2092 | BVU_2358 | BVU_2092 | Uridine kinase. | Putative exported cytochrome C biogenesis-related protein. | 0.454 |
BVU_2358 | BVU_2357 | BVU_2358 | BVU_2357 | Uridine kinase. | Glycoside hydrolase family 23; Related to peptidoglycan lytic transglycosylases. | 0.855 |
BVU_2358 | BVU_2359 | BVU_2358 | BVU_2359 | Uridine kinase. | Conserved hypothetical protein. | 0.707 |
BVU_2358 | BVU_2360 | BVU_2358 | BVU_2360 | Uridine kinase. | Conserved hypothetical protein. | 0.729 |
BVU_2359 | BVU_1894 | BVU_2359 | BVU_1894 | Conserved hypothetical protein. | Fructose-bisphosphate aldolase class I. | 0.403 |
BVU_2359 | BVU_2092 | BVU_2359 | BVU_2092 | Conserved hypothetical protein. | Putative exported cytochrome C biogenesis-related protein. | 0.454 |
BVU_2359 | BVU_2357 | BVU_2359 | BVU_2357 | Conserved hypothetical protein. | Glycoside hydrolase family 23; Related to peptidoglycan lytic transglycosylases. | 0.729 |
BVU_2359 | BVU_2358 | BVU_2359 | BVU_2358 | Conserved hypothetical protein. | Uridine kinase. | 0.707 |
BVU_2359 | BVU_2360 | BVU_2359 | BVU_2360 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.846 |
BVU_2359 | hisB | BVU_2359 | BVU_2364 | Conserved hypothetical protein. | Histidine biosynthesis bifunctional protein HisB; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family. | 0.438 |
BVU_2359 | hisC | BVU_2359 | BVU_2363 | Conserved hypothetical protein. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.458 |
BVU_2359 | hisD | BVU_2359 | BVU_2362 | Conserved hypothetical protein. | Putative histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.453 |
page 1 of 3