STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_2467Conserved hypothetical protein. (102 aa)    
Predicted Functional Partners:
BVU_2466
Conserved hypothetical protein.
 
     0.949
BVU_2469
Tyrosine type site-specific recombinase; Belongs to the 'phage' integrase family.
 
     0.879
BVU_1744
Integrase; Belongs to the 'phage' integrase family.
  
     0.747
BVU_0004
Putative exported protein.
  
     0.631
BVU_2465
DNA primase.
 
     0.610
BVU_2468
Conserved hypothetical protein.
       0.566
BVU_1440
DNA primase.
 
     0.557
BVU_2229
Glycoside hydrolase family 43; Related to beta-glycosidases.
  
     0.509
BVU_3872
Conserved hypothetical protein.
  
     0.492
BVU_1722
Putative transcriptional regulator UpxY-like protein.
  
     0.489
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.