Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BVU_0191 | BVU_2608 | ROK family transcriptional repressor, with glucokinase domain. | Myo-inositol-1-phosphate synthase. | 0.901 |
BVU_0191 | BVU_3804 | ROK family transcriptional repressor, with glucokinase domain. | Putative phosphoglucomutase. | 0.930 |
BVU_2601 | BVU_2602 | Conserved hypothetical protein, putative nucleoside-diphosphate-sugar pyrophosphorylase. | Hypothetical protein. | 0.978 |
BVU_2601 | BVU_2603 | Conserved hypothetical protein, putative nucleoside-diphosphate-sugar pyrophosphorylase. | Conserved hypothetical protein. | 0.961 |
BVU_2601 | BVU_2604 | Conserved hypothetical protein, putative nucleoside-diphosphate-sugar pyrophosphorylase. | Putative transmembrane protein. | 0.911 |
BVU_2601 | BVU_2607 | Conserved hypothetical protein, putative nucleoside-diphosphate-sugar pyrophosphorylase. | Putative ribokinase. | 0.511 |
BVU_2601 | BVU_2608 | Conserved hypothetical protein, putative nucleoside-diphosphate-sugar pyrophosphorylase. | Myo-inositol-1-phosphate synthase. | 0.705 |
BVU_2602 | BVU_2601 | Hypothetical protein. | Conserved hypothetical protein, putative nucleoside-diphosphate-sugar pyrophosphorylase. | 0.978 |
BVU_2602 | BVU_2603 | Hypothetical protein. | Conserved hypothetical protein. | 0.965 |
BVU_2602 | BVU_2604 | Hypothetical protein. | Putative transmembrane protein. | 0.912 |
BVU_2602 | BVU_2607 | Hypothetical protein. | Putative ribokinase. | 0.458 |
BVU_2602 | BVU_2608 | Hypothetical protein. | Myo-inositol-1-phosphate synthase. | 0.684 |
BVU_2603 | BVU_2601 | Conserved hypothetical protein. | Conserved hypothetical protein, putative nucleoside-diphosphate-sugar pyrophosphorylase. | 0.961 |
BVU_2603 | BVU_2602 | Conserved hypothetical protein. | Hypothetical protein. | 0.965 |
BVU_2603 | BVU_2604 | Conserved hypothetical protein. | Putative transmembrane protein. | 0.953 |
BVU_2603 | BVU_2608 | Conserved hypothetical protein. | Myo-inositol-1-phosphate synthase. | 0.728 |
BVU_2604 | BVU_2601 | Putative transmembrane protein. | Conserved hypothetical protein, putative nucleoside-diphosphate-sugar pyrophosphorylase. | 0.911 |
BVU_2604 | BVU_2602 | Putative transmembrane protein. | Hypothetical protein. | 0.912 |
BVU_2604 | BVU_2603 | Putative transmembrane protein. | Conserved hypothetical protein. | 0.953 |
BVU_2604 | BVU_2608 | Putative transmembrane protein. | Myo-inositol-1-phosphate synthase. | 0.523 |
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