STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_2645Glycoside hydrolase family 78; Modular protein with N-terminal candidate rhamnosidase domain and C-terminal domain related to sialidases. (1321 aa)    
Predicted Functional Partners:
BVU_2644
Conserved hypothetical protein.
 
  
 0.948
BVU_2648
Glycoside hydrolase family 78; Related to alpha-L-rhamnosidases.
 
  
 0.868
BVU_2646
Conserved hypothetical protein.
 
  
 0.867
BVU_2647
Conserved hypothetical protein.
 
     0.832
BVU_2696
Conserved hypothetical protein, putative DNA-binding protein.
  
  
 0.780
BVU_2730
Conserved hypothetical protein.
 
  
 0.735
BVU_2733
Conserved hypothetical protein.
 
    0.718
BVU_2932
Conserved hypothetical protein.
 
     0.712
BVU_0174
Glycoside hydrolase family 78; Distantly related to alpha-L-rhamnosidases.
 
     0.710
BVU_1791
Conserved hypothetical protein.
 
  
 0.703
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.