STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_2680Conserved hypothetical protein. (469 aa)    
Predicted Functional Partners:
BVU_2681
Conserved hypothetical protein.
  
 0.950
BVU_2683
Conserved hypothetical protein.
     0.924
BVU_0908
Conserved hypothetical protein.
  
 0.791
BVU_2682
Conserved hypothetical protein.
      
0.778
BVU_2677
Transposase; Belongs to the 'phage' integrase family.
 
     0.763
BVU_0921
Conserved hypothetical protein.
  
 0.743
BVU_1245
Conserved hypothetical protein.
 
  
 0.729
BVU_2679
Conserved hypothetical protein.
   
   0.717
BVU_2684
Integrase; Belongs to the 'phage' integrase family.
 
     0.714
BVU_1943
Conserved hypothetical protein.
  
     0.703
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.