Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVU_0130 | BVU_2724 | BVU_0130 | BVU_2724 | Conserved hypothetical protein. | Putative chaperone DnAJ. | 0.647 |
BVU_0130 | BVU_3300 | BVU_0130 | BVU_3300 | Conserved hypothetical protein. | Chaperone protein. | 0.940 |
BVU_0130 | BVU_3787 | BVU_0130 | BVU_3787 | Conserved hypothetical protein. | Pyruvate-flavodoxin oxidoreductase. | 0.701 |
BVU_0130 | dnaK | BVU_0130 | BVU_2382 | Conserved hypothetical protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.669 |
BVU_1910 | BVU_2724 | BVU_1910 | BVU_2724 | Transcriptional regulator. | Putative chaperone DnAJ. | 0.625 |
BVU_1910 | BVU_2725 | BVU_1910 | BVU_2725 | Transcriptional regulator. | Putative two-component histidine sensor kinase. | 0.456 |
BVU_1910 | BVU_3787 | BVU_1910 | BVU_3787 | Transcriptional regulator. | Pyruvate-flavodoxin oxidoreductase. | 0.485 |
BVU_1910 | dnaK | BVU_1910 | BVU_2382 | Transcriptional regulator. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.419 |
BVU_1910 | grpE | BVU_1910 | BVU_2330 | Transcriptional regulator. | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.435 |
BVU_2723 | BVU_2724 | BVU_2723 | BVU_2724 | Conserved hypothetical protein. | Putative chaperone DnAJ. | 0.975 |
BVU_2723 | BVU_2725 | BVU_2723 | BVU_2725 | Conserved hypothetical protein. | Putative two-component histidine sensor kinase. | 0.540 |
BVU_2723 | BVU_2726 | BVU_2723 | BVU_2726 | Conserved hypothetical protein. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor; Belongs to the 5'-nucleotidase family. | 0.665 |
BVU_2724 | BVU_0130 | BVU_2724 | BVU_0130 | Putative chaperone DnAJ. | Conserved hypothetical protein. | 0.647 |
BVU_2724 | BVU_1910 | BVU_2724 | BVU_1910 | Putative chaperone DnAJ. | Transcriptional regulator. | 0.625 |
BVU_2724 | BVU_2723 | BVU_2724 | BVU_2723 | Putative chaperone DnAJ. | Conserved hypothetical protein. | 0.975 |
BVU_2724 | BVU_2725 | BVU_2724 | BVU_2725 | Putative chaperone DnAJ. | Putative two-component histidine sensor kinase. | 0.659 |
BVU_2724 | BVU_2726 | BVU_2724 | BVU_2726 | Putative chaperone DnAJ. | 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor; Belongs to the 5'-nucleotidase family. | 0.676 |
BVU_2724 | BVU_3300 | BVU_2724 | BVU_3300 | Putative chaperone DnAJ. | Chaperone protein. | 0.800 |
BVU_2724 | BVU_3787 | BVU_2724 | BVU_3787 | Putative chaperone DnAJ. | Pyruvate-flavodoxin oxidoreductase. | 0.892 |
BVU_2724 | dnaK | BVU_2724 | BVU_2382 | Putative chaperone DnAJ. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.973 |
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