STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_2792L-asparaginase II precursor; Belongs to the asparaginase 1 family. (352 aa)    
Predicted Functional Partners:
BVU_3880
Aspartate ammonia-lyase.
 
 
 0.961
BVU_2264
Putative aspartate decarboxylase.
 
  
 0.923
BVU_4094
L-asparaginase I.
  
  
 
0.919
BVU_4009
Asparagine synthetase B.
     
 0.914
BVU_1113
Putative exported L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
   
 
 0.913
BVU_0189
Putative L-asparaginase.
    
 0.910
BVU_0592
Argininosuccinate synthase.
   
 
 0.910
BVU_0144
Aspartate aminotransferase.
    
 0.907
BVU_3865
Aspartate aminotransferase.
    
 0.907
pyrB
Aspartate carbamoyltransferase catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
 0.903
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.