STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_2897Glycosyltransferase family 5; Related to bacterial glycogen synthase. (274 aa)    
Predicted Functional Partners:
BVU_3322
Glycoside hydrolase family 13, candidate 1,4-alpha-glucan branching enzyme.
 
 
 0.993
BVU_1387
Glycoside hydrolase family 77, candidate 4-alpha-glucanotransferase.
  
 
 0.954
BVU_3034
Glycoside hydrolase family 13, candidate pullulanase; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.898
BVU_2896
Conserved hypothetical protein.
  
    0.834
BVU_3559
Glycosyltransferase family 35, candidate alpha-glucan phosphorylase.
 
  
 0.808
BVU_3510
Glycosyltransferase family 35, candidate alpha-glucan phosphorylase.
 
  
 0.806
panC
Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
    0.625
BVU_1382
Glycoside hydrolase family 13, candidate alpha-glycosidase; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.591
BVU_1469
Conserved hypothetical protein.
  
     0.582
BVU_0760
Alcohol dehydrogenase.
   
  
 0.562
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.