Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BVU_1798 | BVU_2915 | Carbohydrate esterase family 8; Related to pectin methylesterases. | Polysaccharide lyase family 1, candidate pectate lyase. | 0.804 |
BVU_2647 | BVU_2685 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.806 |
BVU_2647 | BVU_2696 | Conserved hypothetical protein. | Conserved hypothetical protein, putative DNA-binding protein. | 0.795 |
BVU_2647 | BVU_2730 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.796 |
BVU_2647 | BVU_2912 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.783 |
BVU_2647 | BVU_2913 | Conserved hypothetical protein. | Putative outer membrane protein, probably involved in nutrient binding. | 0.727 |
BVU_2647 | BVU_2914 | Conserved hypothetical protein. | Putative outer membrane protein, probably involved in nutrient binding. | 0.751 |
BVU_2647 | BVU_2915 | Conserved hypothetical protein. | Polysaccharide lyase family 1, candidate pectate lyase. | 0.781 |
BVU_2647 | BVU_2918 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.781 |
BVU_2685 | BVU_2647 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.806 |
BVU_2685 | BVU_2696 | Conserved hypothetical protein. | Conserved hypothetical protein, putative DNA-binding protein. | 0.811 |
BVU_2685 | BVU_2730 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.815 |
BVU_2685 | BVU_2912 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.791 |
BVU_2685 | BVU_2913 | Conserved hypothetical protein. | Putative outer membrane protein, probably involved in nutrient binding. | 0.764 |
BVU_2685 | BVU_2914 | Conserved hypothetical protein. | Putative outer membrane protein, probably involved in nutrient binding. | 0.777 |
BVU_2685 | BVU_2915 | Conserved hypothetical protein. | Polysaccharide lyase family 1, candidate pectate lyase. | 0.782 |
BVU_2685 | BVU_2918 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.774 |
BVU_2696 | BVU_2647 | Conserved hypothetical protein, putative DNA-binding protein. | Conserved hypothetical protein. | 0.795 |
BVU_2696 | BVU_2685 | Conserved hypothetical protein, putative DNA-binding protein. | Conserved hypothetical protein. | 0.811 |
BVU_2696 | BVU_2730 | Conserved hypothetical protein, putative DNA-binding protein. | Conserved hypothetical protein. | 0.782 |
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