Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BVU_0123 | BVU_0489 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.490 |
BVU_0123 | BVU_1868 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.719 |
BVU_0123 | BVU_2964 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.727 |
BVU_0123 | BVU_2965 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.462 |
BVU_0123 | BVU_2966 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.479 |
BVU_0123 | BVU_3231 | Conserved hypothetical protein. | Conserved protein, with a weak D-galactarate dehydratase/altronate hydrolase domain. | 0.688 |
BVU_0489 | BVU_0123 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.490 |
BVU_0489 | BVU_2965 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.486 |
BVU_0489 | BVU_2966 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.490 |
BVU_0489 | BVU_3231 | Conserved hypothetical protein. | Conserved protein, with a weak D-galactarate dehydratase/altronate hydrolase domain. | 0.437 |
BVU_1868 | BVU_0123 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.719 |
BVU_1868 | BVU_2965 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.436 |
BVU_1868 | BVU_2966 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.518 |
BVU_1868 | BVU_3933 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.433 |
BVU_1868 | BVU_4014 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.401 |
BVU_1978 | BVU_1979 | Putative disulphide-isomerase. | Putative outer membrane protein, probably involved in nutrient binding. | 0.900 |
BVU_1978 | BVU_2965 | Putative disulphide-isomerase. | Conserved hypothetical protein. | 0.489 |
BVU_1978 | BVU_2966 | Putative disulphide-isomerase. | Conserved hypothetical protein. | 0.414 |
BVU_1979 | BVU_1978 | Putative outer membrane protein, probably involved in nutrient binding. | Putative disulphide-isomerase. | 0.900 |
BVU_1979 | BVU_2965 | Putative outer membrane protein, probably involved in nutrient binding. | Conserved hypothetical protein. | 0.485 |
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