STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_3175TPR repeat protein. (307 aa)    
Predicted Functional Partners:
BVU_1504
Putative ATPase.
  
 0.925
BVU_3174
Outer membrane protein TolC, putative.
   
 
 0.657
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 
 
 0.558
BVU_3176
Putative two-component system response regulator.
     
 0.491
BVU_1072
ABC transporter ATP-binding protein.
  
  
 0.478
BVU_3177
Two-component system sensor histidine kinase.
       0.476
BVU_3171
Conserved hypothetical protein.
       0.467
BVU_0234
Putative periplasmic protein.
  
 
 0.461
BVU_3173
Conserved hypothetical protein.
       0.453
BVU_3172
Conserved hypothetical protein.
       0.451
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.