STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_3330Putative outer membrane efflux protein. (82 aa)    
Predicted Functional Partners:
BVU_3332
Putative ABC transporter permease protein.
 
   
 0.897
BVU_3331
Putative outer membrane efflux protein.
       0.773
BVU_0292
Putative hemolysin secretion protein.
 
 
 0.566
BVU_4098
Conserved hypothetical protein; Belongs to the P-Pant transferase superfamily.
  
     0.551
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
       0.529
BVU_0260
Conserved hypothetical protein.
  
 
 0.497
BVU_3576
Conserved hypothetical protein, putative membrane protein.
  
 
 0.497
BVU_2080
Conserved hypothetical protein.
  
     0.492
BVU_3809
Conserved hypothetical protein.
  
     0.484
BVU_2984
Conserved hypothetical protein.
 
     0.431
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.