STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_3493Putative outer membrane protein, probably involved in nutrient binding. (898 aa)    
Predicted Functional Partners:
BVU_3494
Putative outer membrane protein, probably involved in nutrient binding.
 
     0.962
BVU_3495
Conserved hypothetical protein, with a cAMP-binding domain.
 
     0.795
BVU_3705
Putative outer membrane protein, probably involved in nutrient binding.
 
 
   0.776
BVU_0390
Putative outer membrane protein, probably involved in nutrient binding.
 
 
   0.744
BVU_0106
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.718
BVU_1855
Putative outer membrane protein, probably involved in nutrient binding.
 
     0.696
BVU_0248
Conserved hypothetical protein.
  
     0.680
BVU_2889
Tetratricopeptide repeat family protein.
  
     0.642
BVU_0960
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.638
BVU_3711
Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.638
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.