Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVU_0771 | BVU_3607 | BVU_0771 | BVU_3607 | Putative oxidoreductase. | Conserved hypothetical protein. | 0.487 |
BVU_1878 | BVU_3607 | BVU_1878 | BVU_3607 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.528 |
BVU_3607 | BVU_0771 | BVU_3607 | BVU_0771 | Conserved hypothetical protein. | Putative oxidoreductase. | 0.487 |
BVU_3607 | BVU_1878 | BVU_3607 | BVU_1878 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.528 |
BVU_3607 | BVU_3608 | BVU_3607 | BVU_3608 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.855 |
BVU_3607 | BVU_3609 | BVU_3607 | BVU_3609 | Conserved hypothetical protein. | ABC transporter ATP-binding protein. | 0.797 |
BVU_3607 | BVU_3610 | BVU_3607 | BVU_3610 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.801 |
BVU_3607 | BVU_3611 | BVU_3607 | BVU_3611 | Conserved hypothetical protein. | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.800 |
BVU_3607 | BVU_3612 | BVU_3607 | BVU_3612 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.720 |
BVU_3607 | BVU_3613 | BVU_3607 | BVU_3613 | Conserved hypothetical protein. | Xanthosine permease. | 0.574 |
BVU_3607 | ackA | BVU_3607 | BVU_0524 | Conserved hypothetical protein. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.633 |
BVU_3608 | BVU_3607 | BVU_3608 | BVU_3607 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.855 |
BVU_3608 | BVU_3609 | BVU_3608 | BVU_3609 | Conserved hypothetical protein. | ABC transporter ATP-binding protein. | 0.967 |
BVU_3608 | BVU_3610 | BVU_3608 | BVU_3610 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.965 |
BVU_3608 | BVU_3611 | BVU_3608 | BVU_3611 | Conserved hypothetical protein. | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.855 |
BVU_3608 | BVU_3612 | BVU_3608 | BVU_3612 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.807 |
BVU_3608 | BVU_3613 | BVU_3608 | BVU_3613 | Conserved hypothetical protein. | Xanthosine permease. | 0.736 |
BVU_3609 | BVU_3607 | BVU_3609 | BVU_3607 | ABC transporter ATP-binding protein. | Conserved hypothetical protein. | 0.797 |
BVU_3609 | BVU_3608 | BVU_3609 | BVU_3608 | ABC transporter ATP-binding protein. | Conserved hypothetical protein. | 0.967 |
BVU_3609 | BVU_3610 | BVU_3609 | BVU_3610 | ABC transporter ATP-binding protein. | Conserved hypothetical protein. | 0.959 |
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