Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BVU_0246 | BVU_0251 | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | NAD-specific glutamate dehydrogenase 1; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.901 |
BVU_0246 | BVU_2272 | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Putative amidohydrolase. | 0.923 |
BVU_0246 | BVU_3530 | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamine synthetase I. | 0.918 |
BVU_0246 | BVU_3604 | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Putative proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydraogenase; Belongs to the aldehyde dehydrogenase family. | 0.950 |
BVU_0246 | BVU_3640 | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Putative NADPH-dependent glutamate synthase. | 0.944 |
BVU_0246 | BVU_4007 | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate synthase, large subunit. | 0.999 |
BVU_0246 | BVU_4008 | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate synthase, small subunit. | 0.944 |
BVU_0251 | BVU_0246 | NAD-specific glutamate dehydrogenase 1; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.901 |
BVU_0251 | BVU_2272 | NAD-specific glutamate dehydrogenase 1; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Putative amidohydrolase. | 0.923 |
BVU_0251 | BVU_3530 | NAD-specific glutamate dehydrogenase 1; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamine synthetase I. | 0.918 |
BVU_0251 | BVU_3604 | NAD-specific glutamate dehydrogenase 1; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Putative proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydraogenase; Belongs to the aldehyde dehydrogenase family. | 0.950 |
BVU_0251 | BVU_3640 | NAD-specific glutamate dehydrogenase 1; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Putative NADPH-dependent glutamate synthase. | 0.944 |
BVU_0251 | BVU_4007 | NAD-specific glutamate dehydrogenase 1; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate synthase, large subunit. | 0.999 |
BVU_0251 | BVU_4008 | NAD-specific glutamate dehydrogenase 1; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate synthase, small subunit. | 0.944 |
BVU_0410 | BVU_3530 | Glutamine-dependent carbamyl phosphate synthetase. | Glutamine synthetase I. | 0.917 |
BVU_0410 | BVU_3640 | Glutamine-dependent carbamyl phosphate synthetase. | Putative NADPH-dependent glutamate synthase. | 0.913 |
BVU_0410 | BVU_3997 | Glutamine-dependent carbamyl phosphate synthetase. | Carbamyl phosphate synthetase. | 0.901 |
BVU_0410 | BVU_4007 | Glutamine-dependent carbamyl phosphate synthetase. | Glutamate synthase, large subunit. | 0.972 |
BVU_0410 | BVU_4008 | Glutamine-dependent carbamyl phosphate synthetase. | Glutamate synthase, small subunit. | 0.913 |
BVU_1437 | BVU_3640 | Conserved hypothetical protein. | Putative NADPH-dependent glutamate synthase. | 0.953 |
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