STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_3684Type I restriction endonuclease S subunit. (212 aa)    
Predicted Functional Partners:
BVU_2833
Conserved hypothetical protein.
  
     0.764
BVU_2836
Putative terminase.
  
     0.761
BVU_2827
Conserved hypothetical protein.
  
     0.760
BVU_2161
Putative glycoside hydrolase; Related to beta-glycosidases.
  
     0.756
BVU_2022
Conserved hypothetical protein.
  
     0.751
BVU_1776
Conserved hypothetical protein.
  
 
   0.722
BVU_0654
Type I restriction enzyme, M subunit.
 
 
 0.720
BVU_0532
Putative polyphosphate-selective porin O.
  
     0.718
BVU_1577
Type I restriction enzyme, M subunit.
 
 
 0.713
BVU_2840
Hypothetical protein.
 
     0.710
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.