STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_3702Conserved hypothetical protein, putative transcriptional regulator. (173 aa)    
Predicted Functional Partners:
BVU_3703
Conserved hypothetical protein.
 
 
 0.966
BVU_0253
Conserved hypothetical protein.
 
 
 0.864
BVU_3704
Conserved hypothetical protein.
       0.790
rsmG
Glucose-inhibited division protein; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.565
BVU_1055
Conserved hypothetical protein.
 
 
 0.530
BVU_3701
Conserved hypothetical protein.
       0.519
BVU_2203
Conserved hypothetical protein.
 
 
 0.492
BVU_0618
Conserved hypothetical protein.
 
 
 0.488
BVU_2124
Conserved protein found in conjugate transposon.
 
 
 0.486
BVU_1558
Conserved protein found in conjugate transposon.
 
 
 0.478
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.