Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BVU_1497 | BVU_2466 | Excisionase. | Conserved hypothetical protein. | 0.545 |
BVU_1497 | BVU_3673 | Excisionase. | Conserved hypothetical protein. | 0.621 |
BVU_1497 | BVU_3722 | Excisionase. | Putative transposase. | 0.751 |
BVU_1497 | BVU_3723 | Excisionase. | Integrase; Belongs to the 'phage' integrase family. | 0.670 |
BVU_1887 | BVU_2935 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.707 |
BVU_1887 | BVU_3722 | Conserved hypothetical protein. | Putative transposase. | 0.697 |
BVU_1887 | BVU_3723 | Conserved hypothetical protein. | Integrase; Belongs to the 'phage' integrase family. | 0.491 |
BVU_1887 | BVU_3732 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.592 |
BVU_2464 | BVU_2466 | Mobilization protein. | Conserved hypothetical protein. | 0.756 |
BVU_2464 | BVU_2935 | Mobilization protein. | Conserved hypothetical protein. | 0.492 |
BVU_2464 | BVU_3718 | Mobilization protein. | Conserved hypothetical protein. | 0.422 |
BVU_2464 | BVU_3722 | Mobilization protein. | Putative transposase. | 0.658 |
BVU_2464 | BVU_3723 | Mobilization protein. | Integrase; Belongs to the 'phage' integrase family. | 0.616 |
BVU_2464 | BVU_3732 | Mobilization protein. | Conserved hypothetical protein. | 0.619 |
BVU_2464 | BVU_3736 | Mobilization protein. | Excisionase. | 0.470 |
BVU_2466 | BVU_1497 | Conserved hypothetical protein. | Excisionase. | 0.545 |
BVU_2466 | BVU_2464 | Conserved hypothetical protein. | Mobilization protein. | 0.756 |
BVU_2466 | BVU_2935 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.401 |
BVU_2466 | BVU_3718 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.542 |
BVU_2466 | BVU_3722 | Conserved hypothetical protein. | Putative transposase. | 0.651 |
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