STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_3783Putative aminoglycoside efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1033 aa)    
Predicted Functional Partners:
BVU_3782
Acriflavine resistance protein A precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.995
BVU_3784
Outer membrane protein oprM precursor.
 0.994
BVU_3591
Multidrug resistance protein MexA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.984
BVU_0244
AcrA/AcrE family multidrug resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.983
BVU_1673
Multidrug efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.983
BVU_1864
Putative membrane fusion protein precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.964
BVU_0242
Outer membrane protein oprM precursor.
 0.950
BVU_3593
Outer membrane protein.
 0.948
BVU_0061
Putative cation efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.943
BVU_0196
Putative outer membrane efflux protein.
 
 0.940
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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