STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_3785Conserved hypothetical protein. (403 aa)    
Predicted Functional Partners:
BVU_1975
Pyruvate carboxylase subunit B.
  
 
 0.994
BVU_1877
Putative biotin-(acetyl-CoA carboxylase) synthetase.
  
 0.913
BVU_0864
Riboflavin biosynthesis protein ribD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
   0.894
BVU_3786
Conserved hypothetical protein.
 
     0.779
BVU_1892
Conserved hypothetical protein.
  
     0.767
BVU_4067
Conserved hypothetical protein.
  
  
 0.757
BVU_3787
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.724
BVU_3832
Conserved hypothetical protein.
  
    0.719
BVU_2080
Conserved hypothetical protein.
  
     0.716
BVU_3625
Conserved hypothetical protein.
  
     0.704
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.