STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_3801Putative two-component system sensor kinase. (683 aa)    
Predicted Functional Partners:
BVU_3800
Two-component system response regulator.
 
 
 0.950
BVU_2588
Two-component system response regulator.
 
 
 0.836
BVU_2805
Two-component system response regulator.
 
 
 0.834
BVU_3601
Two-component system response regulator.
 
 
 0.828
BVU_3802
Conserved hypothetical protein.
       0.570
BVU_2984
Conserved hypothetical protein.
  
     0.483
BVU_3759
Conserved hypothetical protein.
  
     0.443
BVU_2569
Conserved hypothetical protein.
  
     0.432
BVU_1334
Putative TonB-dependent receptor.
  
     0.422
BVU_1657
Conserved hypothetical protein.
  
     0.410
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.