Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVU_2375 | BVU_3955 | BVU_2375 | BVU_3955 | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | Conserved hypothetical protein. | 0.553 |
BVU_2375 | nadA | BVU_2375 | BVU_1145 | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.997 |
BVU_3954 | BVU_3955 | BVU_3954 | BVU_3955 | Xylulose kinase. | Conserved hypothetical protein. | 0.731 |
BVU_3954 | BVU_3989 | BVU_3954 | BVU_3989 | Xylulose kinase. | Malonyl CoA-acyl carrier protein transacylase. | 0.416 |
BVU_3954 | BVU_4073 | BVU_3954 | BVU_4073 | Xylulose kinase. | Putative sugar-transport membrane protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.634 |
BVU_3954 | xylA | BVU_3954 | BVU_3953 | Xylulose kinase. | Xylose isomerase; Belongs to the xylose isomerase family. | 0.992 |
BVU_3955 | BVU_2375 | BVU_3955 | BVU_2375 | Conserved hypothetical protein. | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.553 |
BVU_3955 | BVU_3954 | BVU_3955 | BVU_3954 | Conserved hypothetical protein. | Xylulose kinase. | 0.731 |
BVU_3955 | BVU_3989 | BVU_3955 | BVU_3989 | Conserved hypothetical protein. | Malonyl CoA-acyl carrier protein transacylase. | 0.445 |
BVU_3955 | BVU_4073 | BVU_3955 | BVU_4073 | Conserved hypothetical protein. | Putative sugar-transport membrane protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.454 |
BVU_3955 | nadA | BVU_3955 | BVU_1145 | Conserved hypothetical protein. | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.606 |
BVU_3955 | xylA | BVU_3955 | BVU_3953 | Conserved hypothetical protein. | Xylose isomerase; Belongs to the xylose isomerase family. | 0.618 |
BVU_3989 | BVU_3954 | BVU_3989 | BVU_3954 | Malonyl CoA-acyl carrier protein transacylase. | Xylulose kinase. | 0.416 |
BVU_3989 | BVU_3955 | BVU_3989 | BVU_3955 | Malonyl CoA-acyl carrier protein transacylase. | Conserved hypothetical protein. | 0.445 |
BVU_4073 | BVU_3954 | BVU_4073 | BVU_3954 | Putative sugar-transport membrane protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Xylulose kinase. | 0.634 |
BVU_4073 | BVU_3955 | BVU_4073 | BVU_3955 | Putative sugar-transport membrane protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Conserved hypothetical protein. | 0.454 |
BVU_4073 | xylA | BVU_4073 | BVU_3953 | Putative sugar-transport membrane protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Xylose isomerase; Belongs to the xylose isomerase family. | 0.635 |
nadA | BVU_2375 | BVU_1145 | BVU_2375 | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family. | 0.997 |
nadA | BVU_3955 | BVU_1145 | BVU_3955 | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | Conserved hypothetical protein. | 0.606 |
xylA | BVU_3954 | BVU_3953 | BVU_3954 | Xylose isomerase; Belongs to the xylose isomerase family. | Xylulose kinase. | 0.992 |
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