STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVU_3966Glycosyltransferase family 2; Related to beta-glycosyltransferases. (315 aa)    
Predicted Functional Partners:
BVU_3965
Glycosyltransferase.
 
  
 0.820
BVU_3962
Conserved hypothetical protein.
  
  
 0.789
BVU_3963
Glycosyltransferase family 2; Related to polysaccharide-forming beta-glycosyltransferases.
  
  
 0.789
BVU_3964
Putative acetyltransferase.
  
  
 0.787
BVU_3957
Putative glycosyltransferase.
 
  
 0.569
BVU_3883
Putative UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.501
BVU_3443
Glycosyltransferase family 4; Related to alpha-glycosyltransferases.
 
    0.496
BVU_1727
Glycosyltransferase family 4; Related to alpha-glycosyltransferases.
 
    0.468
BVU_2406
Glycosyltransferase.
 
  
 0.466
BVU_2676
Glycosyltransferase.
 
  
 0.458
Your Current Organism:
Bacteroides vulgatus
NCBI taxonomy Id: 435590
Other names: B. vulgatus ATCC 8482, Bacteroides vulgatus ATCC 8482, Bacteroides vulgatus str. ATCC 8482, Bacteroides vulgatus strain ATCC 8482
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.